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Data and scripts associated with “Drying and rewetting of riverbed sediments results in cold to neutral biogeochemical moments”

Identification

Clé publique

radar:r-83824e3607e15e0b9cdbdbf8ef230b4b

Auteurs

Garayburu-Caruso, Vanessa A. · Laan, Maggi · Coulson, Laura E. · Delgado, Dillman · Forbes, Brieanne · Goldman, Amy E. · McKever, Sophia A. · Renteria, Lupita · Rod, Kenton A. · Veach, Allison · Vergara, Mariana · Stegen, James C.

Année déclarée

2026

Langue déclarée

und

Type source

Dataset

Première détection

2026-11-13T15:29:09.944670+00:00

Dernière observation des métadonnées

2026-11-13T15:29:09.944670+00:00

Dernière vérification HTTP

Non effectuée

Institutions déclarées par la source

Pacific Northwest National Laboratory · University of Vienna · University of Texas at San Antonio

Résumé documentaire — langue originale

This data package is associated with the publication “Drying and rewetting of riverbed sediments results in cold to neutral biogeochemical moments” accepted to Nature Communications Earth and Environment (Garayburu-Caruso et al., 2025; preprint: https://doi.org/10.21203/rs.3.rs-6711373/v1). The analyses draw on three source data packages published through the Environmental System Science Data Infrastructure for a Virtual Ecosystem (ESS-DIVE). The continental United States laboratory moisture-manipulation package (Laan et al., 2024; DOI 10.15485/2428003) provides oxygen-consumption time series and post-incubation sediment and water geochemistry. The WHONDRS (Worldwide Hydrobiogeochemistry Observation Network for Dynamic River Systems) machine-learning-informed continental United States field package (Forbes et al., 2023; DOI 10.15485/1923689; version 4 used in this analysis) provides field metadata, sediment grain-size measurements, and geospatial context. The San Antonio, Texas moisture-manipulation package (Laan et al., 2025; DOI 10.15485/2569752) provides 26 additional samples used in the expanded effect-size analysis. Raw files from these source packages are not duplicated here. The package contains processed data, derived variables, figures, and R scripts used to evaluate how 21-day drying and rewetting influenced riverbed-sediment oxygen consumption across streams and rivers in the contiguous United States. Data used in the analyses include oxygen-consumption rates and treatment effect sizes, sediment grain size and D50, gravimetric moisture, ATP, total organic carbon, total nitrogen, Fe(II), dissolved organic carbon/nitrogen measurements, specific conductance, pH, temperature, and field/geospatial metadata. The package supports reproduction of the manuscript analyses and figures and provides inputs for comparative studies of variable inundation and sediment biogeochemistry. For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About. At the directory level, the associated repository is organized primarily into Data, Figures, and Scripts folders, with several top-level analysis/output files. The Data folder contains manuscript analysis inputs and derived tables; the Figures folder contains manuscript and supplementary figure outputs; and the Scripts folder contains R scripts for D50 calculations, effect-size summaries, LASSO (Least Absolute Shrinkage and Selection Operator) regression, random-forest/SHAP (SHapley Additive exPlanations) analyses, and figure generation. In addition to this readme, this data package also includes a file-level metadata (FLMD) file that describes each file and a data dictionary (DD) that describes all column/row headers and variable definitions. This data package is associated with the ECA_Physical_Manuscript repository found at https://github.com/WHONDRS-Hub/ECA_Physical_Manuscript. File are .Rproj, .csv, or .md.

Identifiants

DOI

10.15485/3422709

OSTI_ID

3422709

Repères documentaires

Famille documentaire

dataset

Types déclarés par les sources

Dataset

Éditeurs

River Corridor Hydro-biogeochemistry from Molecular to Multi-Basin Scales SFA

Les mentions d’entités ne constituent pas une preuve de reconnaissance juridique. La juridiction étudiée est distincte du pays d’affiliation des auteurs.

Sources

DataCite · Document 1

• Document · https://www.osti.gov/servlets/purl/3422709

Statut documentaire

Pertinence à examiner

Bibliothèque

Cette identité n’est pas encore intégrée à la Bibliothèque juridique.